ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A0A2V582_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0A2V582_F1_nD2

A0A0A2V582_F1_nD2

UID: 003631502

AlphaFold

Range: 116-260,281-290
AlphaFold: AF-A0A0A2V582
UniProt: A0A0A2V582 (all domains)
Gene: PAAG_11982

Protein: YbgI/family dinuclear metal center protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in DUF34_NIF3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNIF3 (NGG1p interacting factor 3)-like(7509)

HH-groupNIF3 (NGG1p interacting factor 3)-like(7509.1)

TT-groupNIF3 (NGG1p interacting factor 3)-like(7509.1.1)

FFamilyDUF34_NIF3(7509.1.1.1)

Pfam Families

PF01784DUF34_NIF3

Duf34/NIF3 (NGG1p interacting factor 3)

External Links

AlphaFold DB: A0A0A2V582 UniProt: A0A0A2V582

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 116-260,281-290