ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3a0bf1 - ECOD Domain | ECOD

ECOD/Domains/e3a0bf1

e3a0bf1

UID: 000363151

PDB

Range: f:5011-5045
PDB: 3A0B chain f(all domains)
UniProt: P12239 (all domains)
Gene: psbF

Molecule: Cytochrome b559 subunit beta

3D Structure

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Related Domains

Browse other domains in Cytochrom_B559 →

Classification

AArchitectureextended segments(a.20)

XX-groupCytochrome b559 subunits(5036)

HH-groupCytochrome b559 subunits(5036.1)

TT-groupCytochrome b559 subunits(5036.1.1)

FFamilyCytochrom_B559(5036.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
FerrohemeHEM
drugDrugBank DB18267
(1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE

Pfam Families

PF00283Cytochrom_B559

Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits

External Links

ECOD PDB View: 3A0B RCSB PDB: 3A0B PDBe: 3A0B UniProt: P12239

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONEPQ9

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.