ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gbeA2 - ECOD Domain | ECOD

ECOD/Domains/e3gbeA2

e3gbeA2

UID: 000364071

PDB

Range: A:16-493
PDB: 3GBE chain A(all domains)
UniProt: D0VX20 (all domains)
Gene: smuA

Molecule: Sucrose isomerase SmuA from Protaminobacter rubrum

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

DuvoglustatNOJ
drugDrugBank DB03206

+ 2 additives (1,2-ETHANEDIOL, Citrate anion)

1,2-ETHANEDIOLEDO
Citrate anion

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3GBE RCSB PDB: 3GBE PDBe: 3GBE UniProt: D0VX20

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.