ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gqkA1 - ECOD Domain | ECOD

ECOD/Domains/e3gqkA1

e3gqkA1

UID: 000364263

PDB

Range: A:692-854
PDB: 3GQK chain A(all domains)
UniProt: P20345 (all domains)
Gene: 12

Molecule: Preneck appendage protein

3D Structure

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Related Domains

Browse other domains in Peptidase_G2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupHead decoration protein D (gpD, major capsid protein D)(70.4)

TT-groupHead decoration protein D (gpD, major capsid protein D)(70.4.1)

FFamilyPeptidase_G2(70.4.1.3)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11962Peptidase_G2

Peptidase_G2, IMC autoproteolytic cleavage domain

External Links

ECOD PDB View: 3GQK RCSB PDB: 3GQK PDBe: 3GQK UniProt: P20345

Downloads

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