ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6L8S4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6L8S4_F1_nD2

A0A1D6L8S4_F1_nD2

UID: 003644572

AlphaFold

Range: 181-255,291-300
AlphaFold: AF-A0A1D6L8S4
UniProt: A0A1D6L8S4 (all domains)
Gene: ZEAMMB73_Zm00001d034560

Protein: Ubiquitin-60S ribosomal protein L40

3D Structure

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Related Domains

Browse other domains in Myb_DNA-bind_3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyMyb_DNA-bind_3(101.1.1.121)

Pfam Families

PF12776Myb_DNA-bind_3

Myb/SANT-like DNA-binding domain

ClanCL0123HTH

External Links

AlphaFold DB: A0A1D6L8S4 UniProt: A0A1D6L8S4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 181-255,291-300