ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A1D6JNA5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6JNA5_F1_nD1

A0A1D6JNA5_F1_nD1

UID: 003646564

AlphaFold

Range: 6-555
AlphaFold: AF-A0A1D6JNA5
UniProt: A0A1D6JNA5 (all domains)
Gene: LOC100281446

Protein: Vegetative storage protein

3D Structure

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Related Domains

Browse other domains in PPR, PPR_2, DYW_deaminase, E_motif →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, DYW_deaminase, E_motif(109.4.1.1267)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

PF14432DYW_deaminase

DYW family of nucleic acid deaminases

ClanCL0109CDA

PF20431E_motif

E motif

ClanCL0020TPR

External Links

AlphaFold DB: A0A1D6JNA5 UniProt: A0A1D6JNA5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-555