ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wbmB1 - ECOD Domain | ECOD

ECOD/Domains/e2wbmB1

e2wbmB1

UID: 000364720

PDB

Range: B:82-156
PDB: 2WBM chain B(all domains)
UniProt: O26781 (all domains)
Gene: MTH_685

Molecule: RIBOSOME MATURATION PROTEIN SDO1 HOMOLOG

3D Structure

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Related Domains

Browse other domains in SBDS_domain_II →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupHypothetical protein AF0491, middle domain(103.8)

TT-groupHypothetical protein AF0491, middle domain(103.8.1)

FFamilySBDS_domain_II(103.8.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Sulfate ion, Glycerin)

Sulfate ionSO4
DrugBank DB14546
GlycerinGOL

Pfam Families

PF09377SBDS_domain_II

SBDS protein, domain II

ClanCL0437EF-G_C

External Links

ECOD PDB View: 2WBM RCSB PDB: 2WBM PDBe: 2WBM UniProt: O26781

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.