ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A1D6NYQ2_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6NYQ2_F1_nD5

A0A1D6NYQ2_F1_nD5

UID: 003654746

AlphaFold

Range: 386-435
AlphaFold: AF-A0A1D6NYQ2
UniProt: A0A1D6NYQ2 (all domains)
Gene: ZEAMMB73_Zm00001d045747

Protein: DNA topoisomerase type IA core

3D Structure

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Related Domains

Browse other domains in Toprim_C_rpt →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupMycobacterium tuberculosis Topoisomerase I C-terminal domain(375.13)

TT-groupMycobacterium tuberculosis Topoisomerase I C-terminal domain(375.13.1)

FFamilyToprim_C_rpt(375.13.1.1)

Pfam Families

PF13368Toprim_C_rpt

Topoisomerase C-terminal repeat

External Links

AlphaFold DB: A0A1D6NYQ2 UniProt: A0A1D6NYQ2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 386-435