ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gknB1 - ECOD Domain | ECOD

ECOD/Domains/e3gknB1

e3gknB1

UID: 000365686

PDB

Range: B:0-159
PDB: 3GKN chain B(all domains)
UniProt: Q8P9V9 (all domains)
Gene: bcp

Molecule: Bacterioferritin comigratory protein

3D Structure

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Related Domains

Browse other domains in AhpC-TSA →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupThioredoxin-like(2485.1)

TT-groupThioredoxin-like(2485.1.1)

FFamilyAhpC-TSA(2485.1.1.4)

Ligands

in contact, ≤ 4 Å

Naphthalene-2,6-disulfonic acidBIH
drugDrugBank DB04640

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF00578AhpC-TSA

AhpC/TSA family

ClanCL0172Thioredoxin

External Links

ECOD PDB View: 3GKN RCSB PDB: 3GKN PDBe: 3GKN UniProt: Q8P9V9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.