ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gdhC1 - ECOD Domain | ECOD

ECOD/Domains/e3gdhC1

e3gdhC1

UID: 000366169

PDB

Range: C:641-847
PDB: 3GDH chain C(all domains)
UniProt: Q96RS0 (all domains)
Gene: TGS1

Molecule: Trimethylguanosine synthase homolog

3D Structure

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Related Domains

Browse other domains in Methyltransf_15 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_15(2003.1.5.70)

Ligands

in contact, ≤ 4 Å

7-methyl-guanosine-5'-triphosphateMGP
drugDrugBank DB02716
(S)-propane-1,2-diolPGO
drugDrugBank DB04349

Pfam Families

PF09445Methyltransf_15

RNA cap guanine-N2 methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3GDH RCSB PDB: 3GDH PDBe: 3GDH UniProt: Q96RS0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(R)-Propylene glycolPGR

drugDrugBank DB02159

S-adenosyl-L-homocysteineSAH

drugDrugBank DB01752

Shown in the structure viewer. Drug annotations from DrugDomain.