ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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B6SPL9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/B6SPL9_F1_nD1

B6SPL9_F1_nD1

UID: 003663540

AlphaFold

Range: 16-110
AlphaFold: AF-B6SPL9
UniProt: B6SPL9 (all domains)
Gene: LOC100275173

Protein: DUF4228 domain protein

3D Structure

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Related Domains

Browse other domains in PADRE →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyPADRE(221.1.1.82)

Pfam Families

PADRE domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: B6SPL9 UniProt: B6SPL9

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-110