ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dx4A2 - ECOD Domain | ECOD

ECOD/Domains/e3dx4A2

e3dx4A2

UID: 000366943

PDB

Range: A:30-411
PDB: 3DX4 chain A(all domains)
UniProt: Q24451 (all domains)
Gene: alpha-Man-IIa

Molecule: Alpha-mannosidase 2

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_38N →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupGlycoside hydrolase/deacetylase(2002.3)

TT-groupGlycoside hydrolase/deacetylase(2002.3.1)

FFamilyGlyco_hydro_38N(2002.3.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
(1R,2R,3R,4S,5R)-4-amino-5-methoxycyclopentane-1,2,3-triolGOO
(4R)-2-METHYLPENTANE-2,4-DIOLMRD

Pfam Families

PF01074Glyco_hydro_38N

Glycosyl hydrolases family 38 N-terminal domain

ClanCL0158GH_CE

External Links

ECOD PDB View: 3DX4 RCSB PDB: 3DX4 PDBe: 3DX4 UniProt: Q24451

Downloads

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Zinc ionZN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.