ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vvuA1 - ECOD Domain | ECOD

ECOD/Domains/e2vvuA1

e2vvuA1

UID: 000367268

PDB

Range: A:16-244
PDB: 2VVU chain A(all domains)
UniProt: P00742 (all domains)
Gene: F10

Molecule: ACTIVATED FACTOR XA HEAVY CHAIN

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

5-chloro-N-[(3R)-1-(2-{[2-fluoro-4-(2-oxopyridin-1(2H)-yl)phenyl]amino}-2-oxoethyl)pyrrolidin-3-yl]thiophene-2-carboxamideH22
drugDrugBank DB07872
Calcium ionCA
metal

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 2VVU RCSB PDB: 2VVU PDBe: 2VVU UniProt: P00742

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.