ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3e9hB2 - ECOD Domain | ECOD

ECOD/Domains/e3e9hB2

e3e9hB2

UID: 000367432

PDB

Range: B:145-492
PDB: 3E9H chain B(all domains)
UniProt: Q9RHV9 (all domains)
Gene: lysS

Molecule: Lysyl-tRNA synthetase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2(314.1.1.1)

Ligands

in contact, ≤ 4 Å

5'-O-[(L-LYSYLAMINO)SULFONYL]ADENOSINEKAA
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00152tRNA-synt_2

tRNA synthetases class II (D, K and N)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 3E9H RCSB PDB: 3E9H PDBe: 3E9H UniProt: Q9RHV9

Downloads

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