ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A1C1CTQ0_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1C1CTQ0_F1_nD3

A0A1C1CTQ0_F1_nD3

UID: 003692871

AlphaFold

Range: 386-595
AlphaFold: AF-A0A1C1CTQ0
UniProt: A0A1C1CTQ0 (all domains)
Gene: trl1

Protein: tRNA ligase (EC 6.5.1.3)

3D Structure

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Related Domains

Browse other domains in tRNA_lig_kinase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilytRNA_lig_kinase(2004.1.1.284)

Pfam Families

PF08303tRNA_lig_kinase

tRNA ligase kinase domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: A0A1C1CTQ0 UniProt: A0A1C1CTQ0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 386-595