ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A1C1CNQ0_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/A0A1C1CNQ0_F1_nD6

A0A1C1CNQ0_F1_nD6

UID: 003693780

AlphaFold

Range: 2086-2345
AlphaFold: AF-A0A1C1CNQ0
UniProt: A0A1C1CNQ0 (all domains)
Gene: Prpf8

Protein: Pre-mRNA-processing-splicing factor 8

3D Structure

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Related Domains

Browse other domains in JAB,PROCT →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilyJAB,PROCT(2492.1.1.3)

Pfam Families

JAB1/Mov34/MPN/PAD-1 ubiquitin protease

ClanCL0366JAB

PROCT (NUC072) domain

External Links

AlphaFold DB: A0A1C1CNQ0 UniProt: A0A1C1CNQ0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 2086-2345