ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1C1CTQ0_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A1C1CTQ0_F1_nD4

A0A1C1CTQ0_F1_nD4

UID: 003696745

AlphaFold

Range: 631-820
AlphaFold: AF-A0A1C1CTQ0
UniProt: A0A1C1CTQ0 (all domains)
Gene: trl1

Protein: tRNA ligase (EC 6.5.1.3)

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA_lig_CPD →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLigT-like(264)

HH-groupLigT-related(264.1)

TT-groupLigT-related(264.1.1)

FFamilytRNA_lig_CPD(264.1.1.10)

Pfam Families

PF08302tRNA_lig_CPD

Fungal tRNA ligase phosphodiesterase domain

ClanCL02472H

External Links

AlphaFold DB: A0A1C1CTQ0 UniProt: A0A1C1CTQ0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 631-820