ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3e0qA1 - ECOD Domain | ECOD

ECOD/Domains/e3e0qA1

e3e0qA1

UID: 000369704

PDB

Range: A:5-287
PDB: 3E0Q chain A(all domains)
UniProt: Q9BMI9 (all domains)

Molecule: Purine-nucleoside phosphorylase

3D Structure

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Related Domains

Browse other domains in PNP_UDP_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupPeptidyl-tRNA hydrolase-like(2011.2)

TT-groupPeptidyl-tRNA hydrolase-like(2011.2.1)

FFamilyPNP_UDP_1(2011.2.1.1)

Ligands

in contact, ≤ 4 Å

6-amino-5-bromo-1,2,3,4-tetrahydropyrimidine-2,4-dioneJFD

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01048PNP_UDP_1

Phosphorylase superfamily

ClanCL0408PUP

External Links

ECOD PDB View: 3E0Q RCSB PDB: 3E0Q PDBe: 3E0Q UniProt: Q9BMI9

Downloads

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