ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ie4B1 - ECOD Domain | ECOD

ECOD/Domains/e3ie4B1

e3ie4B1

UID: 000370281

PDB

Range: B:1-101
PDB: 3IE4 chain B(all domains)
UniProt: Q9NHA8 (all domains)
Gene: GNBP3

Molecule: Gram-Negative Binding Protein 3

3D Structure

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Related Domains

Browse other domains in CBM39 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCBM39(11.1.1.191)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Carbohydrate binding domain (family 32)

ClanCL0159E-set

External Links

ECOD PDB View: 3IE4 RCSB PDB: 3IE4 PDBe: 3IE4 UniProt: Q9NHA8

Downloads

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