ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q4D1D5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q4D1D5_F1_nD2

Q4D1D5_F1_nD2

UID: 003709497

AlphaFold

Range: 56-200
AlphaFold: AF-Q4D1D5
UniProt: Q4D1D5 (all domains)
Gene: Tc00.1047053509367.51

Protein: tRNA ligase phosphodiesterase domain-containing protein

3D Structure

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Related Domains

Browse other domains in tRNA_lig_CPD →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLigT-like(264)

HH-groupLigT-related(264.1)

TT-groupLigT-related(264.1.1)

FFamilytRNA_lig_CPD(264.1.1.10)

Pfam Families

PF08302tRNA_lig_CPD

Fungal tRNA ligase phosphodiesterase domain

ClanCL02472H

External Links

AlphaFold DB: Q4D1D5 UniProt: Q4D1D5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 56-200