ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3i7gB1 - ECOD Domain | ECOD

ECOD/Domains/e3i7gB1

e3i7gB1

UID: 000371735

PDB

Range: B:104-269
PDB: 3I7G chain B(all domains)
UniProt: P45452 (all domains)
Gene: MMP13

Molecule: Collagenase 3

3D Structure

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Related Domains

Browse other domains in Peptidase_M10 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M10(2498.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Zinc ionZN
metal

+ 1 additive (Formic acid)

Formic acid

Pfam Families

PF00413Peptidase_M10

Matrixin

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 3I7G RCSB PDB: 3I7G PDBe: 3I7G UniProt: P45452

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.