ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3igrB1 - ECOD Domain | ECOD

ECOD/Domains/e3igrB1

e3igrB1

UID: 000371767

PDB

Range: B:2-184
PDB: 3IGR chain B(all domains)
UniProt: Q5DZH6 (all domains)
Gene: rimJ

Molecule: Ribosomal-protein-S5-alanine N-acetyltransferase

3D Structure

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Related Domains

Browse other domains in Acetyltransf_3 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyAcetyltransf_3(213.1.1.25)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13302Acetyltransf_3

Acetyltransferase (GNAT) domain

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 3IGR RCSB PDB: 3IGR PDBe: 3IGR UniProt: Q5DZH6

Downloads

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