ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3i5yA2 - ECOD Domain | ECOD

ECOD/Domains/e3i5yA2

e3i5yA2

UID: 000372250

PDB

Range: A:334-596
PDB: 3I5Y chain A(all domains)
UniProt: P15424 (all domains)
Gene: MSS116

Molecule: ATP-dependent RNA helicase MSS116

3D Structure

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Related Domains

Browse other domains in Helicase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyHelicase_C(2004.1.1.30)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid-adenylate esterANP
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3I5Y RCSB PDB: 3I5Y PDBe: 3I5Y UniProt: P15424

Downloads

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