ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3in5B3 - ECOD Domain | ECOD

ECOD/Domains/e3in5B3

e3in5B3

UID: 000372293

PDB

Range: B:22-121,B:170-223,B:284-345
PDB: 3IN5 chain B(all domains)
UniProt: Q9UBT6 (all domains)
Gene: POLK

Molecule: DNA polymerase kappa

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyIMS(304.48.1.10)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

impB/mucB/samB family

External Links

ECOD PDB View: 3IN5 RCSB PDB: 3IN5 PDBe: 3IN5 UniProt: Q9UBT6

Downloads

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