ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0D2GJC9_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2GJC9_F1_nD4

A0A0D2GJC9_F1_nD4

UID: 003733909

AlphaFold

Range: 456-585,616-740
AlphaFold: AF-A0A0D2GJC9
UniProt: A0A0D2GJC9 (all domains)
Gene: Z517_08503

Protein: Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence

3D Structure

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Related Domains

Browse other domains in DNA_pol_B_thumb,DNA_pol_B_palm →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyDNA_pol_B_thumb,DNA_pol_B_palm(316.1.1.24)

Pfam Families

PF14791DNA_pol_B_thumb

DNA polymerase beta thumb

PF14792DNA_pol_B_palm

DNA polymerase beta palm

ClanCL0260NTP_transf

External Links

AlphaFold DB: A0A0D2GJC9 UniProt: A0A0D2GJC9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 456-585,616-740