ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3iqeE1 - ECOD Domain | ECOD

ECOD/Domains/e3iqeE1

e3iqeE1

UID: 000374319

PDB

Range: E:2-283
PDB: 3IQE chain E(all domains)
UniProt: P94951 (all domains)
Gene: mtd

Molecule: F420-dependent methylenetetrahydromethanopterin dehydrogenase

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupF420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)(2007.1.18)

FFamilyMTD(2007.1.18.1)

Ligands

in contact, ≤ 4 Å

Coenzyme F420F42
drugDrugBank DB03913
5,10-Dimethylene TetrahydromethanopterinH4M
drugDrugBank DB03481

Pfam Families

methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase

External Links

ECOD PDB View: 3IQE RCSB PDB: 3IQE PDBe: 3IQE UniProt: P94951

Downloads

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Calcium ionCA

metal

Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.