ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3iqeF1 - ECOD Domain | ECOD

ECOD/Domains/e3iqeF1

e3iqeF1

UID: 000374320

PDB

Range: F:2-283
PDB: 3IQE chain F(all domains)
UniProt: P94951 (all domains)
Gene: mtd

Molecule: F420-dependent methylenetetrahydromethanopterin dehydrogenase

3D Structure

Loading viewer...

Related Domains

Browse other domains in MTD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupF420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)(2007.1.18)

FFamilyMTD(2007.1.18.1)

Ligands

in contact, ≤ 4 Å

Coenzyme F420F42
drugDrugBank DB03913
5,10-Dimethylene TetrahydromethanopterinH4M
drugDrugBank DB03481

Pfam Families

methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase

External Links

ECOD PDB View: 3IQE RCSB PDB: 3IQE PDBe: 3IQE UniProt: P94951

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.