ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3iqfE1 - ECOD Domain | ECOD

ECOD/Domains/e3iqfE1

e3iqfE1

UID: 000374325

PDB

Range: E:2-283
PDB: 3IQF chain E(all domains)
UniProt: P94951 (all domains)
Gene: mtd

Molecule: F420-dependent methylenetetrahydromethanopterin dehydrogenase

3D Structure

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Related Domains

Browse other domains in MTD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupF420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)(2007.1.18)

FFamilyMTD(2007.1.18.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
1-{4-[(6S,6aR,7R)-3-amino-6,7-dimethyl-1-oxo-1,2,5,6,6a,7-hexahydro-8H-imidazo[1,5-f]pteridin-10-ium-8-yl]phenyl}-1-deoxy-5-O-{5-O-[(S)-{[(1S)-1,3-dicarboxypropyl]oxy}(hydroxy)phosphoryl]-alpha-D-ribofuranosyl}-D-ribitolE4M

Shown in the structure viewer.

Pfam Families

methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase

External Links

ECOD PDB View: 3IQF RCSB PDB: 3IQF PDBe: 3IQF UniProt: P94951

Downloads

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Drug annotations from DrugDomain.