ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3iqzB1 - ECOD Domain | ECOD

ECOD/Domains/e3iqzB1

e3iqzB1

UID: 000374334

PDB

Range: B:2-283
PDB: 3IQZ chain B(all domains)
UniProt: P94951 (all domains)
Gene: mtd

Molecule: F420-dependent methylenetetrahydromethanopterin dehydrogenase

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupF420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)(2007.1.18)

FFamilyMTD(2007.1.18.1)

Ligands

in contact, ≤ 4 Å

5,10-Dimethylene TetrahydromethanopterinH4M
drugDrugBank DB03481
Calcium ionCA
metal
Sodium ion

Pfam Families

methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase

External Links

ECOD PDB View: 3IQZ RCSB PDB: 3IQZ PDBe: 3IQZ UniProt: P94951

Downloads

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metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.