ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3a4mA1 - ECOD Domain | ECOD

ECOD/Domains/e3a4mA1

e3a4mA1

UID: 000374901

PDB

Range: A:5-177
PDB: 3A4M chain A(all domains)
UniProt: Q58933 (all domains)
Gene: pstK

Molecule: L-seryl-tRNA(Sec) kinase

3D Structure

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Related Domains

Browse other domains in KTI12 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyKTI12(2004.1.1.163)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Magnesium ionMG
metal
Iodide ion

Pfam Families

Chromatin associated protein KTI12

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3A4M RCSB PDB: 3A4M PDBe: 3A4M UniProt: Q58933

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.