ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5RK30_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5RK30_F1_nD3

Q5RK30_F1_nD3

UID: 003754699

AlphaFold

Range: 166-250
AlphaFold: AF-Q5RK30
UniProt: Q5RK30 (all domains)
Gene: Sbds

Protein: Ribosome maturation protein SBDS (Shwachman-Bodian-Diamond syndrome protein homolog)

3D Structure

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Related Domains

Browse other domains in SBDS_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupEF-G C-terminal domain-like(304.24)

TT-groupEF-G C-terminal domain-like(304.24.1)

FFamilySBDS_C(304.24.1.6)

Pfam Families

SBDS protein, C-terminal domain

ClanCL0437EF-G_C

External Links

AlphaFold DB: Q5RK30 UniProt: Q5RK30

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 166-250