ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2j6eA2 - ECOD Domain | ECOD

ECOD/Domains/e2j6eA2

e2j6eA2

UID: 000037714

PDB

Range: A:342-443
PDB: 2J6E chain A(all domains)
UniProt: P01857 (all domains)
Gene: IGHG1

Molecule: IG GAMMA-1 CHAIN C REGION

3D Structure

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Related Domains

Browse other domains in C1-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyC1-set(11.1.1.96)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal
Zinc ionZN
metal

+ 3 additives (Acetate, (4r)-2-Methylpentane-2,4-Diol, Cacodylate ion)

Acetate

Pfam Families

Immunoglobulin C1-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 2J6E RCSB PDB: 2J6E PDBe: 2J6E UniProt: P01857

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

(4r)-2-Methylpentane-2,4-DiolMPD

DrugBank DB03564

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.