ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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G3V6H2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/G3V6H2_F1_nD2

G3V6H2_F1_nD2

UID: 003775963

AlphaFold

Range: 811-1185
AlphaFold: AF-G3V6H2
UniProt: G3V6H2 (all domains)
Gene: Prpf8

Protein: Pre-mRNA-processing-splicing factor 8 (Splicing factor Prp8)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRRM_4(304.48.1.25)

Pfam Families

RNA recognition motif of the spliceosomal PrP8

External Links

AlphaFold DB: G3V6H2 UniProt: G3V6H2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 811-1185