ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3iisM1 - ECOD Domain | ECOD

ECOD/Domains/e3iisM1

e3iisM1

UID: 000377884

PDB

Range: M:0-150
PDB: 3IIS chain M(all domains)
UniProt: P80484 (all domains)

Molecule: Peridinin-chlorophyll a-binding protein 1, chloroplastic

3D Structure

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Related Domains

Browse other domains in PCP →

Classification

AArchitecturealpha bundles(a.7)

XX-groupPeridinin-chlorophyll protein(569)

HH-groupPeridinin-chlorophyll protein(569.1)

TT-groupPeridinin-chlorophyll protein(569.1.1)

FFamilyPCP(569.1.1.1)

Ligands

in contact, ≤ 4 Å

Chlorophyll ACLA
drugDrugBank DB02133
PeridininPID
drugDrugBank DB03001
Cadmium ion

Pfam Families

Peridinin-chlorophyll A binding protein

External Links

ECOD PDB View: 3IIS RCSB PDB: 3IIS PDBe: 3IIS UniProt: P80484

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Chloride ionCL

(2S)-3-[(6-O-alpha-D-galactopyranosyl-beta-D-galactopyranosyl)oxy]-2-[(3Z,6Z,9Z,12Z,15Z)-octadeca-3,6,9,12,15-pentaenoyloxy]propyl (5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoateJ7Z

Potassium ionK

metal

Shown in the structure viewer. Drug annotations from DrugDomain.