ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wkeD1 - ECOD Domain | ECOD

ECOD/Domains/e2wkeD1

e2wkeD1

UID: 000378528

PDB

Range: D:164-238
PDB: 2WKE chain D(all domains)
UniProt: P39045 (all domains)
Gene: dac

Molecule: D-ALANYL-D-ALANINE CARBOXYPEPTIDASE

3D Structure

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Related Domains

Browse other domains in Peptidase_S13 →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupInserted beta sandwich domain in Dac-like proteins(4334)

HH-groupInserted beta sandwich domain in Dac-like proteins(4334.1)

TT-groupInserted beta sandwich domain in Dac-like proteins(4334.1.1)

FFamilyPeptidase_S13(4334.1.1.1)

Ligands

in contact, ≤ 4 Å

COBALT (II) IONCO
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02113Peptidase_S13

D-Ala-D-Ala carboxypeptidase 3 (S13) family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 2WKE RCSB PDB: 2WKE PDBe: 2WKE UniProt: P39045

Downloads

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