ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ipoB1 - ECOD Domain | ECOD

ECOD/Domains/e3ipoB1

e3ipoB1

UID: 000378792

PDB

Range: B:143-290
PDB: 3IPO chain B(all domains)
UniProt: P78067 (all domains)
Gene: ynjE

Molecule: Putative thiosulfate sulfurtransferase ynjE

3D Structure

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Related Domains

Browse other domains in Rhodanese →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupFlavoproteins/Phosphotyrosine protein phosphatases-like(2007.2)

TT-groupRhodanese/Cell cycle control phosphatase(2007.2.5)

FFamilyRhodanese(2007.2.5.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Phosphate ion, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL)

Phosphate ionPO4
DrugBank DB14523
2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOLPE4

Pfam Families

PF00581Rhodanese

Rhodanese-like domain

ClanCL0031Phosphatase

External Links

ECOD PDB View: 3IPO RCSB PDB: 3IPO PDBe: 3IPO UniProt: P78067

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.