ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PEV9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PEV9_F1_nD2

A0A1D8PEV9_F1_nD2

UID: 003788359

AlphaFold

Range: 146-240
AlphaFold: AF-A0A1D8PEV9
UniProt: A0A1D8PEV9 (all domains)
Gene: CAALFM_C110470WA

Protein: Small ribosomal subunit protein uS5m

3D Structure

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Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilyRibosomal_S5(330.1.1.2)

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

AlphaFold DB: A0A1D8PEV9 UniProt: A0A1D8PEV9

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 146-240