ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D8PND6_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1D8PND6_F1_nD3

A0A1D8PND6_F1_nD3

UID: 003789111

AlphaFold

Range: 436-589
AlphaFold: AF-A0A1D8PND6
UniProt: A0A1D8PND6 (all domains)
Gene: RIB2

Protein: tRNA pseudouridine(32) synthase (EC 5.4.99.28)

3D Structure

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Related Domains

Browse other domains in dCMP_cyt_deam_1 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilydCMP_cyt_deam_1(2492.1.1.1)

Pfam Families

PF00383dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

ClanCL0109CDA

External Links

AlphaFold DB: A0A1D8PND6 UniProt: A0A1D8PND6

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 436-589