ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3a7kD1 - ECOD Domain | ECOD

ECOD/Domains/e3a7kD1

e3a7kD1

UID: 000379147

PDB

Range: D:19-277
PDB: 3A7K chain D(all domains)
UniProt: Q3ITX1 (all domains)

Molecule: Halorhodopsin

3D Structure

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Related Domains

Browse other domains in Bac_rhodopsin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamilyBac_rhodopsin(5001.1.1.6)

Ligands

in contact, ≤ 4 Å

1,2-Di-1-(3,7,11,15-Tetramethyl-Hexadecane)-Sn-Glycero-3-PhosphateL1P
drugDrugBank DB03402
2,3-di-O-phytanyl-sn-glycerolL2P
drugDrugBank DB03646

Pfam Families

PF01036Bac_rhodopsin

Bacteriorhodopsin-like protein

ClanCL0192GPCR_A

External Links

ECOD PDB View: 3A7K RCSB PDB: 3A7K PDBe: 3A7K UniProt: Q3ITX1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(2S)-2,3-bis{[(3R,7R)-3,7,11,15-tetramethylhexadecyl]oxy}propyl (2R)-2-hydroxy-3-[(hydroxyphosphinato)oxy]propyl phosphateL3P

drugDrugBank DB02293

Bacterioruberin22B

Chloride ionCL

RetinalRET

Shown in the structure viewer. Drug annotations from DrugDomain.