ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gshB1 - ECOD Domain | ECOD

ECOD/Domains/e3gshB1

e3gshB1

UID: 000379219

PDB

Range: B:1-91
PDB: 3GSH chain B(all domains)
UniProt: P07597 (all domains)
Gene: LTP1

Molecule: Non-specific lipid-transfer protein 1

3D Structure

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Related Domains

Browse other domains in Tryp_alpha_amyl →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like(185)

HH-groupBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA(185.1)

TT-groupBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin(185.1.1)

FFamilyTryp_alpha_amyl(185.1.1.1)

Ligands

in contact, ≤ 4 Å

(12E)-10-oxooctadec-12-enoic acidASY
Sodium ionNA
metal
trifluoroacetic acidTFA
Zinc ion

Pfam Families

PF00234Tryp_alpha_amyl

Protease inhibitor/seed storage/LTP family

ClanCL0482Prolamin

External Links

ECOD PDB View: 3GSH RCSB PDB: 3GSH PDBe: 3GSH UniProt: P07597

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.