ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3fmuA1 - ECOD Domain | ECOD

ECOD/Domains/e3fmuA1

e3fmuA1

UID: 000379811

PDB

Range: A:1-319
PDB: 3FMU chain A(all domains)
UniProt: O94753 (all domains)
Gene: vpl2

Molecule: Versatile peroxidase VPL2

3D Structure

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Related Domains

Browse other domains in peroxidase,Peroxidase_ext →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHeme-dependent peroxidases(136)

HH-groupHeme-dependent peroxidases(136.1)

TT-groupHeme-dependent peroxidases(136.1.1)

FFamilyperoxidase,Peroxidase_ext(136.1.1.2)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Calcium ionCA
metal
FE (III) IONFE

Pfam Families

PF00141peroxidase

Peroxidase

ClanCL0617Peroxidase

PF11895Peroxidase_ext

Fungal peroxidase extension region

ClanCL0617Peroxidase

External Links

ECOD PDB View: 3FMU RCSB PDB: 3FMU PDBe: 3FMU UniProt: O94753

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Zinc ionZN

metal

+ 1 additive (Cacodylate ion)

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.