ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1P6C3I9_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A1P6C3I9_F1_nD4

A0A1P6C3I9_F1_nD4

UID: 003798765

AlphaFold

Range: 266-320
AlphaFold: AF-A0A1P6C3I9
UniProt: A0A1P6C3I9 (all domains)
Gene: Bma-rle-1

Protein: RING-type E3 ubiquitin transferase (EC 2.3.2.27)

3D Structure

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Related Domains

Browse other domains in ROQ_II →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyROQ_II(101.1.1.83)

Pfam Families

Roquin II domain

ClanCL0123HTH

External Links

AlphaFold DB: A0A1P6C3I9 UniProt: A0A1P6C3I9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 266-320