ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0H5S3W4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0H5S3W4_F1_nD2

A0A0H5S3W4_F1_nD2

UID: 003800989

AlphaFold

Range: 66-275
AlphaFold: AF-A0A0H5S3W4
UniProt: A0A0H5S3W4 (all domains)
Gene: Bma-sel-11

Protein: E3 ubiquitin-protein ligase hrd-1 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase hrd-1) (Suppressor/enhancer of lin-12)

3D Structure

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Related Domains

Browse other domains in TPR_SYVN1_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_SYVN1_N(109.4.1.1375)

Pfam Families

PF25563TPR_SYVN1_N

E3 ubiquitin-protein ligase synoviolin-like, TPR repeats

ClanCL0020TPR

External Links

AlphaFold DB: A0A0H5S3W4 UniProt: A0A0H5S3W4

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 66-275