ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9T0I6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9T0I6_F1_nD2

Q9T0I6_F1_nD2

UID: 003802289

AlphaFold

Range: 836-1205
AlphaFold: AF-Q9T0I6
UniProt: Q9T0I6 (all domains)
Gene: PRP8B

Protein: Pre-mRNA-processing-splicing factor 8B (PRP8 homolog B) (AtPRP8B)

3D Structure

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Related Domains

Browse other domains in RRM_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRRM_4(304.48.1.25)

Pfam Families

RNA recognition motif of the spliceosomal PrP8

External Links

AlphaFold DB: Q9T0I6 UniProt: Q9T0I6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 836-1205