ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9MAT0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9MAT0_F1_nD1

Q9MAT0_F1_nD1

UID: 003803391

AlphaFold

Range: 6-280,321-795
AlphaFold: AF-Q9MAT0
UniProt: Q9MAT0 (all domains)
Gene: RPN2B

Protein: 26S proteasome non-ATPase regulatory subunit 1 homolog B (26S proteasome regulatory subunit RPN2b) (AtRPN2b) (26S proteasome regulatory subunit S1 homolog B)

3D Structure

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Related Domains

Browse other domains in PC_rep, HEAT_2, RPN2_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-group26S proteasome subunit Rpn2 N-terminal domain(109.34)

TT-group26S proteasome subunit Rpn2 N-terminal domain(109.34.1)

FFamilyPC_rep, HEAT_2, RPN2_N(109.34.1.5)

Pfam Families

Proteasome/cyclosome repeat

ClanCL0020TPR

HEAT repeats

ClanCL0020TPR

26S proteasome subunit RPN2, N-terminal domain

ClanCL0020TPR

External Links

AlphaFold DB: Q9MAT0 UniProt: Q9MAT0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-280,321-795