ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P49688_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P49688_F1_nD2

P49688_F1_nD2

UID: 003804106

AlphaFold

Range: 46-55,96-160
AlphaFold: AF-P49688
UniProt: P49688 (all domains)
Gene: RPS2C

Protein: Small ribosomal subunit protein uS5x (40S ribosomal protein S2-3) (AtRPS2C)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilyRibosomal_S5(330.1.1.2)

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

AlphaFold DB: P49688 UniProt: P49688

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 46-55,96-160