ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q0WMY5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q0WMY5_F1_nD3

Q0WMY5_F1_nD3

UID: 003804606

AlphaFold

Range: 516-620
AlphaFold: AF-Q0WMY5
UniProt: Q0WMY5 (all domains)
Gene: PPR4

Protein: Pentatricopeptide repeat-containing protein At5g04810, chloroplastic (Maize PPR4 homolog) (AtPPR4)

3D Structure

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Related Domains

Browse other domains in PPR, PPR_2, PPR_3 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, PPR_3(109.4.1.1256)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat domain

ClanCL0020TPR

External Links

AlphaFold DB: Q0WMY5 UniProt: Q0WMY5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 516-620