ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LFF1_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9LFF1_F1_nD5

Q9LFF1_F1_nD5

UID: 003804772

AlphaFold

Range: 541-754
AlphaFold: AF-Q9LFF1
UniProt: Q9LFF1 (all domains)
Gene: MEE40

Protein: Pentatricopeptide repeat-containing protein At3g53700, chloroplastic (Protein MATERNAL EFFECT EMBRYO ARREST 40)

3D Structure

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Related Domains

Browse other domains in PPR_1, PPR_2, TPR_24 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR_1, PPR_2, TPR_24(109.4.1.1277)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat-containing protein

ClanCL0020TPR

External Links

AlphaFold DB: Q9LFF1 UniProt: Q9LFF1

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 541-754