ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q0WSH6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0WSH6_F1_nD1

Q0WSH6_F1_nD1

UID: 003807308

AlphaFold

Range: 6-684
AlphaFold: AF-Q0WSH6
UniProt: Q0WSH6 (all domains)
Gene: LOI1

Protein: Pentatricopeptide repeat-containing protein At4g14850 (Protein LOVASTATIN INSENSITIVE 1)

3D Structure

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Related Domains

Browse other domains in PPR, PPR_2, PPR_3, DYW_deaminase, E_motif →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, PPR_3, DYW_deaminase, E_motif(109.4.1.1291)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat domain

ClanCL0020TPR

PF14432DYW_deaminase

DYW family of nucleic acid deaminases

ClanCL0109CDA

External Links

AlphaFold DB: Q0WSH6 UniProt: Q0WSH6

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-684

PF20431E_motif

E motif

ClanCL0020TPR