ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9SYK1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9SYK1_F1_nD2

Q9SYK1_F1_nD2

UID: 003807463

AlphaFold

Range: 151-300
AlphaFold: AF-Q9SYK1
UniProt: Q9SYK1 (all domains)
Gene: At1g05600

Protein: Pentatricopeptide repeat-containing protein At1g05600

3D Structure

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Related Domains

Browse other domains in PPR_1, PPR_2 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR_1, PPR_2(109.4.1.1257)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

External Links

AlphaFold DB: Q9SYK1 UniProt: Q9SYK1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 151-300